Information for 7-CAGAACTCTGAACCGC (Motif 12)

A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
Reverse Opposite:
A C T G A G T C A C T G A C T G A C G T A G C T A G T C G C T A A T C G C T G A A C T G A C G T A C G T A G T C A C G T A C T G
p-value:1e-11
log p-value:-2.722e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.5 +/- 18.2bp
Average Position of motif in Background21.6 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGAACTCTGAACCGC---
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGAACTCTGAACCGC---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGAACTCTGAACCGC
-TGGACTTTGNNCTCN
 A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGAACTCTGAACCGC-
-TGGACTTTGNNCTNTG
 A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

NR2C2/MA0504.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CAGAACTCTGAACCGC
-TGACCTCTGACCCCN
 A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CAGAACTCTGAACCGC
ATTGGACTTTGACCCC-
 A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGAACTCTGAACCGC
--GWAAYHTGABMC--
 A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:8
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CAGAACTCTGAACCGC
TATCATTAGAACGCT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAGAACTCTGAACCGC
-TGACCTTTGACCTC-
 A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C A C G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CAGAACTCTGAACCGC
-TGACCTTTGACCCC-
 A G T C C G T A A C T G G T C A C G T A A G T C A G C T A T G C C A G T A C T G C T G A C G T A A G T C G T A C A C T G G T A C
A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T