p-value: | 1e-3 |
log p-value: | -9.044e+00 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.28% |
Number of Background Sequences with motif | 1.3 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 81.3 +/- 5.9bp |
Average Position of motif in Background | 66.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0079.1_Sry_1/Jaspar
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT---- NANTATTATAATTNNN |
|
|
|
PB0069.1_Sox21_1/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT---- NNTAATTATAATNANN |
|
|
|
PB0064.1_Sox14_1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT---- NNTAATTATAATTNNN |
|
|
|
PB0174.1_Sox30_2/Jaspar
Match Rank: | 4 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT---- NCGTATTATAATCNTA |
|
|
|
HMBOX1/MA0895.1/Jaspar
Match Rank: | 5 |
Score: | 0.59 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT GTTAACTAGN-- |
|
|
|
PH0040.1_Hmbox1/Jaspar
Match Rank: | 6 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TTACTATAGT-- GANGTTAACTAGTTTNN |
|
|
|
SOX9/MA0077.1/Jaspar
Match Rank: | 7 |
Score: | 0.57 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | TTACTATAGT-- ---CCATTGTTC |
|
|
|
Arid5a/MA0602.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT-- NNTNNCAATATTAG |
|
|
|
PB0002.1_Arid5a_1/Jaspar
Match Rank: | 9 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TTACTATAGT-- NNTNNCAATATTAG |
|
|
|
PB0129.1_Glis2_2/Jaspar
Match Rank: | 10 |
Score: | 0.55 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTACTATAGT AATATTAATAAAGA |
|
|
|