Information for 10-GATTAGCGGG (Motif 25)

A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
Reverse Opposite:
A G T C A G T C A G T C T C A G A T G C A C G T C G T A C G T A A C G T A T G C
p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.771
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.65%
Number of Background Sequences with motif55.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.8 +/- 28.0bp
Average Position of motif in Background46.3 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GATTAGCGGG
GGATTAGC---
 A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGCGGG
NNGGATTAGN---
 A C G T A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GATTAGCGGG
RGGATTAR----
 A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGCGGG
GNGGATTAGN---
 A C G T A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCGGG
CGGATTAN----
 A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGCGGG
VRGGATTARN---
 A C G T A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCGGG
GGGATTANN---
 A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GATTAGCGGG
ACCGATTAG----
 A C G T A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCGGG
NGGATTAA----
 A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:10
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GATTAGCGGG-
AGGGGGATTAGCTGCC
 A C G T A C G T A C G T A C G T A C G T A T C G G T C A G A C T A C G T C G T A A T C G A G T C C T A G A C T G C T A G A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C