Information for 1-NTGTTTWCHTTTS (Motif 2)

T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
Reverse Opposite:
A T C G C G T A C G T A C G T A C G T A C T A G G C T A C G T A C G T A C G T A A G T C C G T A A C G T
p-value:1e-17
log p-value:-4.033e+01
Information Content per bp:1.721
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.44%
Number of Background Sequences with motif145.2
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets50.6 +/- 30.1bp
Average Position of motif in Background46.7 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:NTGTTTWCHTTTS
-TGTTTACTTT--
 T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:NTGTTTWCHTTTS
-TGTTTACTTT--
 T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
A C G T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:3
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--NTGTTTWCHTTTS
CTTTGTTTACTTTTN
 A C G T A C G T T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.84
Offset:-1
Orientation:reverse strand
Alignment:-NTGTTTWCHTTTS
TTTGTTTACTTA--
 A C G T T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.83
Offset:1
Orientation:forward strand
Alignment:NTGTTTWCHTTTS
-TGTTTATTT---
 T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T A C G T A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:6
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---NTGTTTWCHTTTS
TCCATGTTTACTTTG-
 A C G T A C G T A C G T T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:7
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-NTGTTTWCHTTTS
CBTGTTTAYAWW--
 A C G T T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:NTGTTTWCHTTTS
NTGTTTAYATWW-
 T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:9
Score:0.81
Offset:1
Orientation:forward strand
Alignment:NTGTTTWCHTTTS
-TRTTTACTTW--
 T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
A C G T A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.81
Offset:-4
Orientation:reverse strand
Alignment:----NTGTTTWCHTTTS
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T T C G A A C G T T C A G A C G T A C G T A C G T C G A T A G T C G C A T A C G T C G A T G C A T A T G C
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T