Information for 5-GGGCAGGGTGACT (Motif 12)

A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T
Reverse Opposite:
C T G A A T C G A C G T G T A C G T C A A T G C A G T C A G T C A C G T A C T G G T A C G A T C G T A C
p-value:1e-12
log p-value:-2.947e+01
Information Content per bp:1.789
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.79%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets48.3 +/- 22.4bp
Average Position of motif in Background50.6 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESR2/MA0258.2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGGCAGGGTGACT-
AGGNCANNGTGACCT
 A C G T A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGCAGGGTGACT--
GGTCANNGTGACCTN
 A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T
C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGGGTGACT--
CAGGTCACCGTGACCTT
 A C G T A C G T A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T
T G A C T C G A A C T G A T C G A C G T A G T C T C G A A G T C A T G C A C T G A G C T C T A G G T C A A G T C G T A C A G C T G A C T

PPARG/MA0066.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGGGTGACT----
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T A C G T A C G T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

JUNB/MA0490.1/Jaspar

Match Rank:5
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGGCAGGGTGACT---
-----GGATGACTCAT
 A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGGCAGGGTGACT---
-----GGATGACTCAT
 A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GGGCAGGGTGACT----
------GGTGACTCATG
 A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G

Pax2/MA0067.1/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGGCAGGGTGACT
-----NCGTGACN
 A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T
A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGGCAGGGTGACT----
-----GGATGACTCATC
 A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGGCAGGGTGACT
AGGTCAAGGTCA--
 A C G T A C T G C T A G A C T G T A G C C G T A T C A G C T A G A T C G A C G T A C T G C G T A A T G C A G C T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T