Information for 6-GGTGGATTTG (Motif 9)

C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G
Reverse Opposite:
A G T C C T G A C G T A G T C A G C A T A G T C A G T C T C G A G T A C A G T C
p-value:1e-9
log p-value:-2.261e+01
Information Content per bp:1.828
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif140.9
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets55.6 +/- 25.5bp
Average Position of motif in Background51.4 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--GGTGGATTTG
NNTGTGGATTSS
 A C G T A C G T C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:GGTGGATTTG
-GTGGAT---
 C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGTGGATTTG-
TGTGGATTNNN
 C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGTGGATTTG-----
AGGGGGATTAGCTGCC
 A C G T C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GGTGGATTTG-
---GGATTAGC
 C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGTGGATTTG
AAGAGGATTAG
 A C G T C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGTGGATTTG-
-VRGGATTARN
 C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGTGGATTTG-
--GGGATTANN
 C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

Gfi1/MA0038.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGTGGATTTG
CNGTGATTTN
 C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGTGGATTTG----
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T C T A G A C T G A G C T A C T G A C T G C G T A A C G T A C G T A G C T C T A G A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T