Information for 1-RCTGATTACA (Motif 4)

C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A
Reverse Opposite:
G A C T A C T G C G A T G T C A T C G A G C A T A G T C C T G A T A C G G A T C
p-value:1e-13
log p-value:-3.039e+01
Information Content per bp:1.578
Number of Target Sequences with motif115.0
Percentage of Target Sequences with motif13.43%
Number of Background Sequences with motif3094.4
Percentage of Background Sequences with motif6.37%
Average Position of motif in Targets52.5 +/- 27.4bp
Average Position of motif in Background49.2 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:RCTGATTACA--
GGTGYTGACAGS
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A A C G T A C G T
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:RCTGATTACA
-CTGTTTAC-
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A
A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T

Foxo1/MA0480.1/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-RCTGATTACA
TCCTGTTTACA
 A C G T C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A
C A G T A T G C A G T C A C G T A C T G A C G T A C G T A C G T G C T A A G T C G C T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:RCTGATTACA
--TGTTTACH
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A
A C G T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---RCTGATTACA----
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A A C G T A C G T A C G T A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

DUXA/MA0884.1/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:RCTGATTACA----
-NTGATTAAATTAN
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A A C G T A C G T A C G T A C G T
A C G T G A C T G C A T T C A G T G C A A G C T A C G T T C G A T C G A C T G A A G C T G A C T C T G A C T A G

FOXP2/MA0593.1/Jaspar

Match Rank:7
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:RCTGATTACA-
TNTGTTTACTT
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A A C G T
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T

FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-RCTGATTACA-
NYYTGTTTACHN
 A C G T C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A A C G T
A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:RCTGATTACA--
CNTGTTTACATA
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A A C G T A C G T
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXI1/MA0042.2/Jaspar

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:RCTGATTACA
--TGTTTAC-
 C T A G A T G C G A C T T C A G C G T A A G C T C A G T G C T A T G A C C T G A
A C G T A C G T A G C T C T A G G C A T A C G T A C G T C G T A A G T C A C G T