Information for 2-GCCCAGGAGCCACMTC (Motif 19)

A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
Reverse Opposite:
T A C G C G T A A C T G A C T G A C G T A C T G A T C G A G T C A C G T G T A C A G T C A C G T A T C G A C T G A C T G G T A C
p-value:1e-7
log p-value:-1.822e+01
Information Content per bp:1.768
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets62.8 +/- 16.5bp
Average Position of motif in Background43.0 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGGAGCCACMTC
TGCCCAGNHW-------
 A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GCCCAGGAGCCACMTC
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCCCAGGAGCCACMTC---
---NNGGCGACACCTCNNN
 A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGGAGCCACMTC
TGCCCTGAGGGCA----
 A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGGAGCCACMTC
TGCCCNNAGGGCA----
 A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCCCAGGAGCCACMTC
TGCCCTGAGGGCA----
 A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
G C A T A T C G A G T C A G T C A G T C A G C T A C T G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGGAGCCACMTC
TGCGCAGGCGC------
 A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGGAGCCACMTC
TCCCCTGGGGAC-----
 A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GCCCAGGAGCCACMTC
CAGGCCNNGGCCNN-----
 A C G T A C G T A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCCAGGAGCCACMTC
CCGCCCAAGGGCAG----
 A C G T A C G T A C T G A G T C A G T C A T G C T C G A A C T G A C T G T G C A C T A G A T G C A G T C T C G A A G T C T G A C C G A T A G T C
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G A C G T A C G T A C G T A C G T