p-value: | 1e-8 |
log p-value: | -1.974e+01 |
Information Content per bp: | 1.658 |
Number of Target Sequences with motif | 37.0 |
Percentage of Target Sequences with motif | 4.32% |
Number of Background Sequences with motif | 672.5 |
Percentage of Background Sequences with motif | 1.38% |
Average Position of motif in Targets | 45.0 +/- 26.4bp |
Average Position of motif in Background | 49.1 +/- 26.0bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.05 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax6/MA0069.1/Jaspar
Match Rank: | 1 |
Score: | 0.76 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACGCATGACT- TTCACGCATGAGTT |
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PAX1/MA0779.1/Jaspar
Match Rank: | 2 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACGCATGACT--- CGTCACGCATGACTGCA |
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PAX9/MA0781.1/Jaspar
Match Rank: | 3 |
Score: | 0.72 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----ACGCATGACT--- CGTCACGCATGACTGCA |
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Pax2/MA0067.1/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ACGCATGACT --NCGTGACN |
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MAFG::NFE2L1/MA0089.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ACGCATGACT ---CATGAC- |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 6 |
Score: | 0.67 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ACGCATGACT-- GTCATGCHTGRCTGS |
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Mitf/MA0620.1/Jaspar
Match Rank: | 7 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ACGCATGACT NCACGTGACN |
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PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 8 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---ACGCATGACT------- TTTMCGCTTSABTGAACACN |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.63 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----ACGCATGACT-- NGTCACGCTTGGCTGC |
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NFE2/MA0841.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ACGCATGACT---- ---CATGACTCATC |
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