Information for 14-GATAGGCTTC (Motif 39)

A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
Reverse Opposite:
C T A G G T C A T C G A A C T G A G T C A G T C C G A T C G T A A C G T A G T C
p-value:1e-4
log p-value:-1.015e+01
Information Content per bp:1.879
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif55.6
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.4 +/- 28.4bp
Average Position of motif in Background49.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--GATAGGCTTC
CCGATTGGCT--
 A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GATAGGCTTC-
TGATTGGCTANN
 A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C A C G T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GATAGGCTTC---
CTGATTGGTCNATTT
 A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C A C G T A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GATAGGCTTC
AAGATATCCTT-
 A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GATAGGCTTC
--TWGTCTGV
 A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GATAGGCTTC
----NGCTN-
 A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:7
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GATAGGCTTC-
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C A C G T
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

GATA5/MA0766.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATAGGCTTC
AGATAAGA---
 A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
G C T A A C T G C T G A A C G T G C T A C T G A T A C G T C G A A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GATAGGCTTC-
-----GCTTCC
 A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATAGGCTTC
NVAGATAAGR---
 A C G T A C G T A C G T A C T G C G T A A C G T C G T A A C T G A C T G A G T C A G C T A C G T A G T C
T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A A C G T A C G T A C G T