Motif 35

Information for 16-CCTCCGCCCCTKC (Motif 35)

Reverse Opposite:

p-value:	1e-6
log p-value:	-1.488e+01
Information Content per bp:	1.836
Number of Target Sequences with motif	12.0
Percentage of Target Sequences with motif	1.56%
Number of Background Sequences with motif	109.2
Percentage of Background Sequences with motif	0.23%
Average Position of motif in Targets	42.9 +/- 24.2bp
Average Position of motif in Background	48.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)	0.3
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

PB0110.1_Bcl6b_2/Jaspar

Match Rank:	1
Score:	0.68
Offset:	-1
Orientation:	forward strand
Alignment:	-CCTCCGCCCCTKC-- ATCCCCGCCCCTAAAA

PB0202.1_Zfp410_2/Jaspar

Match Rank:	2
Score:	0.67
Offset:	-2
Orientation:	forward strand
Alignment:	--CCTCCGCCCCTKC-- TCACCCCGCCCCAAATT

EGR1/MA0162.2/Jaspar

Match Rank:	3
Score:	0.67
Offset:	0
Orientation:	forward strand
Alignment:	CCTCCGCCCCTKC- CCCCCGCCCCCGCC

SP1/MA0079.3/Jaspar

Match Rank:	4
Score:	0.64
Offset:	0
Orientation:	forward strand
Alignment:	CCTCCGCCCCTKC GCCCCGCCCCC--

PB0010.1_Egr1_1/Jaspar

Match Rank:	5
Score:	0.63
Offset:	2
Orientation:	forward strand
Alignment:	CCTCCGCCCCTKC--- --TCCGCCCCCGCATT

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:	6
Score:	0.62
Offset:	3
Orientation:	forward strand
Alignment:	CCTCCGCCCCTKC-- ---SNGCACCTGCHS

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:	7
Score:	0.61
Offset:	0
Orientation:	reverse strand
Alignment:	CCTCCGCCCCTKC GCTCCGCCCMCY-

POL003.1_GC-box/Jaspar

Match Rank:	8
Score:	0.61
Offset:	-2
Orientation:	reverse strand
Alignment:	--CCTCCGCCCCTKC NAGCCCCGCCCCCN-

ZEB1/MA0103.2/Jaspar

Match Rank:	9
Score:	0.60
Offset:	3
Orientation:	forward strand
Alignment:	CCTCCGCCCCTKC ---CCTCACCTG-

SP2/MA0516.1/Jaspar

Match Rank:	10
Score:	0.59
Offset:	0
Orientation:	forward strand
Alignment:	CCTCCGCCCCTKC-- GCCCCGCCCCCTCCC