Information for 12-CCSGGCTGGGTGAGGG (Motif 17)

A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
Reverse Opposite:
A T G C A G T C A G T C A G C T G T A C C T G A A G T C A G T C A G T C G T C A A C T G A G T C G T A C T A G C T A C G C T A G
p-value:1e-9
log p-value:-2.146e+01
Information Content per bp:1.781
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.0 +/- 28.4bp
Average Position of motif in Background60.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCSGGCTGGGTGAGGG
TCNCCTGCTGNGNNN---
 A C G T A C G T A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:2
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCSGGCTGGGTGAGGG
------GGGGNGGGGC
 A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C

Klf4/MA0039.2/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CCSGGCTGGGTGAGGG
------TGGGTGGGGC
 A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCSGGCTGGGTGAGGG
GGCCYCCTGCTGDGH-----
 A C G T A C G T A C G T A C G T A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCSGGCTGGGTGAGGG
CCCCCTGCTGTG------
 A C G T A C G T A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCSGGCTGGGTGAGGG-
-----GTGGGGGAGGGG
 A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:7
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCSGGCTGGGTGAGGG-
-----MKGGGYGTGGCC
 A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCSGGCTGGGTGAGGG
------TGGGTGTGGC
 A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCSGGCTGGGTGAGGG
TNTCCTGCTGTGNNG---
 A C G T A C G T A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCSGGCTGGGTGAGGG-
------TGGGTGTGGCN
 A G T C A G T C A T C G A C T G A C T G G T A C A C G T A C T G C T A G C T A G G A C T A C T G C T G A A C T G C T A G A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C