Information for 22-AGRTAGATCTAGTAGA (Motif 44)

C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
Reverse Opposite:
A C G T A T G C A G C T C G T A A G T C A G C T C G T A C T A G C G T A A G C T A G T C A G C T C G T A G A C T A G T C A C G T
p-value:1e-4
log p-value:-9.366e+00
Information Content per bp:1.801
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.0 +/- 19.8bp
Average Position of motif in Background79.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORA(var.2)/MA0072.1/Jaspar

Match Rank:1
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGRTAGATCTAGTAGA
TATAAGTAGGTCAA-----
 A C G T A C G T A C G T C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.49
Offset:4
Orientation:forward strand
Alignment:AGRTAGATCTAGTAGA
----AGGTCAAGGTCA
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:3
Score:0.49
Offset:0
Orientation:forward strand
Alignment:AGRTAGATCTAGTAGA
AAYTAGGTCA------
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:4
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:AGRTAGATCTAGTAGA----
----NNNTTAGGTAGCNTNT
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.47
Offset:3
Orientation:reverse strand
Alignment:AGRTAGATCTAGTAGA---
---AANTTCAAGTGGCTTN
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.46
Offset:-2
Orientation:forward strand
Alignment:--AGRTAGATCTAGTAGA
VCAGGTRDRY--------
 A C G T A C G T C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.46
Offset:0
Orientation:forward strand
Alignment:AGRTAGATCTAGTAGA
AGATAAGA--------
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:8
Score:0.45
Offset:4
Orientation:forward strand
Alignment:AGRTAGATCTAGTAGA
----AGGTCAAGGTCA
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:AGRTAGATCTAGTAGA----
----NNTGTAGGTAGCANNT
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.45
Offset:6
Orientation:reverse strand
Alignment:AGRTAGATCTAGTAGA
------NTCAAGTGG-
 C G T A A C T G C T A G A C G T C T G A A C T G C T G A C G A T A G T C C G A T C T G A C T A G A C G T C T G A A T C G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T