Information for 18-CCCACTGTTTCTAACC (Motif 36)

A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
Reverse Opposite:
A C T G C T A G A C G T A G C T C G T A A C T G C G T A C G T A C T G A A G T C C G T A A C T G A C G T A C T G C T A G C T A G
p-value:1e-6
log p-value:-1.480e+01
Information Content per bp:1.913
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.9 +/- 23.1bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxq1/MA0040.1/Jaspar

Match Rank:1
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCCACTGTTTCTAACC
--TATTGTTTATT---
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A C G T G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCCACTGTTTCTAACC
-CCATTGTTYB-----
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCCACTGTTTCTAACC
NCCATTGTTC------
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

SOX9/MA0077.1/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CCCACTGTTTCTAACC
-CCATTGTTC------
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CCCACTGTTTCTAACC
-CCATTGTTTT-----
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CCCACTGTTTCTAACC
NCCATTGTTY------
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCCACTGTTTCTAACC
----CTGTTTAC----
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:8
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCCACTGTTTCTAACC
-----TGTTTAC----
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CCCACTGTTTCTAACC
---CBTGTTTAYAWW-
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CCCACTGTTTCTAACC
----NTGTTTAYATWW
 A G T C A G T C A G T C G T C A A G T C A C G T A C T G A G C T A C G T A C G T G T A C A C G T C T G A C G T A A G T C A G T C
A C G T A C G T A C G T A C G T C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A