p-value: | 1e-8 |
log p-value: | -2.052e+01 |
Information Content per bp: | 1.915 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.64% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 60.0 +/- 25.4bp |
Average Position of motif in Background | 43.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.60 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG--- ---------CCAGACRSVB |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.56 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG- ---------CCAGACAG |
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HINFP/MA0131.2/Jaspar
Match Rank: | 3 |
Score: | 0.52 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG--- -------NCGCGGACGTTG |
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PB0155.1_Osr2_2/Jaspar
Match Rank: | 4 |
Score: | 0.51 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ATGCAAGGAGCAGACG NNTGTAGGTAGCANNT- |
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NRF1/MA0506.1/Jaspar
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 6 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG- ------TGCGCAGGCGC |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.49 |
Offset: | 9 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG- ---------BCAGACWA |
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POL013.1_MED-1/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG -----CGGAGC----- |
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Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer
Match Rank: | 8 |
Score: | 0.48 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | ATGCAAGGAGCAGACG -----GGGAGGACNG- |
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Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer
Match Rank: | 9 |
Score: | 0.48 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATGCAAGGAGCAGACG MTGATGCAAT--------- |
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Mafb/MA0117.2/Jaspar
Match Rank: | 10 |
Score: | 0.47 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | ATGCAAGGAGCAGACG ----AAAATGCTGACT |
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