Information for 15-GCGGAACACT (Motif 41)

A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G C G A T A C T G A C G T A C G T A G T C A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.243e+01
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets34.4 +/- 15.8bp
Average Position of motif in Background44.4 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPIB/MA0081.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCGGAACACT
AGAGGAA----
 A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
C G T A T A C G T G C A C T A G C A T G C G T A C G T A A C G T A C G T A C G T A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAACACT-----
NNNNNGAACAATTGANN
 A C G T A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GCGGAACACT-----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGGAACACT
CCAGGAACAG-
 A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAACACT
RCCGGAAGTD-
 A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGAACACT-----
TCACGGAACAATAGGTG
 A C G T A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAACACT
RCCGGAARYN-
 A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGGAACACT---
---AASCACTCAA
 A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCGGAACACT
---NAACAAT
 A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAACACT
DCCGGAARYN-
 A C G T A C T G A G T C C T A G A C T G C G T A C G T A A G T C C G T A A G T C A C G T
C T G A T A G C T G A C T A C G C T A G G T C A G C T A T C A G G A C T T C A G A C G T