Information for 12-AGTTTCTGAGGGT (Motif 23)

C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C A C G T A G T C C G T A A C T G C G T A C G T A C T G A G T A C A C G T
p-value:1e-8
log p-value:-2.052e+01
Information Content per bp:1.940
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.4 +/- 29.5bp
Average Position of motif in Background49.8 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGTTTCTGAGGGT-
----TATGCGGGTA
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCTGAGGGT-
NAATTTTACGAGNTNN
 A C G T A C G T C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AGTTTCTGAGGGT-
---GTCTGTGGTTT
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

PH0048.1_Hoxa13/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTCTGAGGGT-
ANATTTTACGAGNNNN
 A C G T A C G T C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTTTCTGAGGGT
-TTTTATKRGG--
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGTTTCTGAGGGT----
-NNNNATGCGGGTNNNN
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGTTTCTGAGGGT
---TTCTNMGGAA
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T
A C G T A C G T A C G T C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A

GCM1/MA0646.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:AGTTTCTGAGGGT--
----CATGCGGGTAC
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGTTTCTGAGGGT
CTGTTGCTAGGS--
 A C G T C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGTTTCTGAGGGT
ATTTCCTGTN---
 C G T A A C T G A G C T A C G T A C G T A G T C A C G T A C T G T C G A A C T G A C T G A C T G A C G T
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T