Information for 8-TAATCWGMAA (Motif 22)

C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
Reverse Opposite:
C A G T A G C T C A T G A G T C C G T A T C A G C G T A C A G T G C A T G C T A
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.598
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif122.4
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets43.3 +/- 24.0bp
Average Position of motif in Background52.4 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NOTO/MA0710.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TAATCWGMAA
NNTAATTAGN--
 A C G T A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
T A C G A G T C G A C T G T C A C G T A A C G T C A G T C G T A C T A G A T G C A C G T A C G T

VSX2/MA0726.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAATCWGMAA
NTAATTAG---
 A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
T G A C G A C T C G T A C T G A A C G T C G A T C T G A T C A G A C G T A C G T A C G T

LHX2/MA0700.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TAATCWGMAA
NNTAATTAGN--
 A C G T A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
T A C G G A C T G A C T T G C A C G T A A G C T C A G T C T G A T C A G A G C T A C G T A C G T

VSX1/MA0725.1/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TAATCWGMAA
NTAATTAG---
 A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
T G C A G A C T G T C A C T G A A G C T C A G T C T G A C T A G A C G T A C G T A C G T

Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TAATCWGMAA
TAATTAGN--
 C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
A G C T G T C A C G T A A C G T A C G T C T G A T C A G A T G C A C G T A C G T

EVX1/MA0887.1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATCWGMAA
GNTAATTANN--
 A C G T A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C A C G T A C G T

LBX1/MA0618.1/Jaspar

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TAATCWGMAA
TTAATTAG---
 A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T A C G T A C G T

LHX6/MA0658.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAATCWGMAA
ACTAATTAGC--
 A C G T A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
T C G A A G T C A G C T T C G A G T C A A G C T A G C T C T G A T C A G A G T C A C G T A C G T

PAX4/MA0068.2/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TAATCWGMAA
CTAATTAG---
 A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
A G T C C A G T C G T A G T C A A C G T C G A T G T C A T C A G A C G T A C G T A C G T

EVX2/MA0888.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TAATCWGMAA
NNTAATTANN--
 A C G T A C G T C G A T C G T A G T C A G C A T A G T C G C A T T C A G G T A C T C G A G T C A
T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C A C G T A C G T