Information for 7-GCATACTCTA (Motif 20)

A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A
Reverse Opposite:
A C G T C T G A A C T G C G T A A C T G A C G T C G T A G A C T A C T G A T G C
p-value:1e-9
log p-value:-2.164e+01
Information Content per bp:1.862
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif18.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets56.7 +/- 28.0bp
Average Position of motif in Background55.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GCATACTCTA-
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCATACTCTA
ATGAATATTC--
 A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCATACTCTA
ATGMATATDC--
 A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCATACTCTA-----
-NNTAATCCNGNCNN
 A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T G A T C G T A C G C A T T G C A G T C A G A C T G T A C A G T C T C A G A T C G C T A G A G T C T G C A C G T A

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:5
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GCATACTCTA--
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PH0148.1_Pou3f3/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:forward strand
Alignment:-------GCATACTCTA
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCATACTCTA-
-RSCACTYRAG
 A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T
A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCATACTCTA--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

PB0176.1_Sox5_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCATACTCTA---
TATCATAATTAAGGA
 A C G T A C G T A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:GCATACTCTA-----
---GGCTCYAKCAYC
 A T C G T A G C C G T A A C G T C G T A A G T C A C G T A G T C A G C T G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C