Information for 3-AAATGCTGAAAAGCAT (Motif 2)

C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
Reverse Opposite:
C G T A A C G T T A C G A T G C A C G T A C G T A C G T C A G T T A G C C G T A A C T G A T G C C G T A A G C T C G A T G C A T
p-value:1e-15
log p-value:-3.656e+01
Information Content per bp:1.710
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif5.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.7 +/- 23.1bp
Average Position of motif in Background69.5 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AAATGCTGAAAAGCAT--
-TAAACTGATAAGAAGAT
 C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T A C G T A C G T
A C G T G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATGCTGAAAAGCAT
AAAATGCTGACT-----
 A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAATGCTGAAAAGCAT
AAAWWTGCTGACWWD---
 A C G T A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATGCTGAAAAGCAT
AGGACGCTGTAAAGGGA
 A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAATGCTGAAAAGCAT----
----GCAGCCAAGCGTGACN
 C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

BCL6B/MA0731.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AAATGCTGAAAAGCAT
TGAATTCCTAGAAAGCA-
 A C G T A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:AAATGCTGAAAAGCAT
----GCTGTCAA----
 C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAATGCTGAAAAGCAT
AAGACGCTGTAAAGCGA
 A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-AAATGCTGAAAAGCAT
AAGACGCTGTAAAGCGA
 A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-AAATGCTGAAAAGCAT
AATTTGCTGAC------
 A C G T C G T A G C T A T C G A C G A T A T C G A G T C C G A T A T C G G C T A T G C A C G T A C G T A A T C G A G T C G T C A A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T