Information for 10-GGAAAAGCCCTGCHGC (Motif 16)

C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
Reverse Opposite:
C T A G A G T C C G T A A T C G A G T C C G T A A C T G A C T G T A C G A G T C A G C T A C G T A C G T A C G T A G T C A G T C
p-value:1e-9
log p-value:-2.254e+01
Information Content per bp:1.746
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 32.5bp
Average Position of motif in Background40.3 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGAAAAGCCCTGCHGC
GGAAATCCCC------
 C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGAAAAGCCCTGCHGC
GGGRAARRGRMCAGMTG-
 A C G T A C G T C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
C A T G A C T G C T A G T C G A T C G A T C G A T C G A T C A G T C A G T C A G T G A C T G A C C G T A A C T G T G C A C G A T A C T G A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GGAAAAGCCCTGCHGC
GGAAANCCCC------
 C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAGCCCTGCHGC
GGGAAATCCCCN-----
 A C G T C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGAAAAGCCCTGCHGC
GGAAATTCCC------
 C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGAAAAGCCCTGCHGC
GGAAATTCCC------
 C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAAAAGCCCTGCHGC
TGGAAAA----------
 A C G T C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAGCCCTGCHGC
AATGGAAAAT---------
 A C G T A C G T A C G T C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GGAAAAGCCCTGCHGC
NNTGGAAANN---------
 A C G T A C G T A C G T C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:GGAAAAGCCCTGCHGC
-----AGGCCTNG---
 C T A G C T A G C G T A C G T A G T C A C T G A T C A G A T G C A G T C G T A C C G A T A C T G A T G C G C A T C T A G A G T C
A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T