p-value: | 1e-9 |
log p-value: | -2.254e+01 |
Information Content per bp: | 1.839 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.72% |
Number of Background Sequences with motif | 2.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 40.2 +/- 21.3bp |
Average Position of motif in Background | 70.5 +/- 4.6bp |
Strand Bias (log2 ratio + to - strand density) | -2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer
Match Rank: | 1 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA GKMTCADRTTWC- |
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ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGATTGAGTTTCA AGTTTCAGTTTC- |
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IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer
Match Rank: | 3 |
Score: | 0.68 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA-- -----TGGTTTCAGT |
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IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GGATTGAGTTTCA AGTTTCAKTTTC- |
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IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer
Match Rank: | 5 |
Score: | 0.64 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA ACTTTCACTTTC- |
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IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer
Match Rank: | 6 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA RSTTTCRSTTTC- |
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IRF8/MA0652.1/Jaspar
Match Rank: | 7 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA- AGTTTCGGTTTCGN |
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CHR(?)/Hela-CellCycle-Expression/Homer
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGATTGAGTTTCA-- -----CGGTTTCAAA |
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PB0037.1_Isgf3g_1/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA------ ----TNAGTTTCGATTTTN |
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IRF9/MA0653.1/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGATTGAGTTTCA-- AGTTTCGGTTTCGTT |
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