Information for 25-GCTGGGGTGTCCC (Motif 41)

A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C
Reverse Opposite:
A C T G A C T G A C T G C G T A A G T C C G T A A G T C A G T C A G T C A G T C C G T A A C T G A G T C
p-value:1e-1
log p-value:-4.277e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.0 +/- 31.3bp
Average Position of motif in Background81.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCTGGGGTGTCCC--
---GGGGATTCCCCC
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

PB0156.1_Plagl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCTGGGGTGTCCC----
GCTGGGGGGTACCCCTT
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
C T A G A G T C G C A T C T A G C A T G A C T G C T A G A C T G A C T G A C G T C T G A G A T C G T A C G T A C G A T C G A C T C G A T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GCTGGGGTGTCCC
---GGGGATTTCC
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C
A C G T A C G T A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GCTGGGGTGTCCC--
--AGGGGAATCCCCT
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCTGGGGTGTCCC
GGGGGTGTGTCC-
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTGGGGTGTCCC--
--AGGGGATTCCCCT
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
A C G T A C G T T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGGTGTCCC--
NTNTGGGGGGTCNNNA
 A C G T A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C A C G T A C G T
G T A C G A C T T C A G A C G T C T A G C T A G C A T G C A T G A C T G A C T G A C G T T G A C A T C G C G T A C G A T C T G A

SREBF2/MA0596.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCTGGGGTGTCCC
-ATGGGGTGAT--
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C
A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTGGGGTGTCCC
GCTGTGGTTT---
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTGGGGTGTCCC
CGTGGGTGGTCC-
 A C T G A G T C A C G T A C T G A C T G A C T G A C T G A C G T A C T G A C G T A G T C A G T C A G T C
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T