p-value: | 1e-4 |
log p-value: | -9.243e+00 |
Information Content per bp: | 1.939 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.30% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 68.5 +/- 12.5bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PAX9/MA0781.1/Jaspar
Match Rank: | 1 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCACGCTTGACGG-- CGTCACGCATGACTGCA |
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PAX1/MA0779.1/Jaspar
Match Rank: | 2 |
Score: | 0.74 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCACGCTTGACGG-- CGTCACGCATGACTGCA |
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Pax6/MA0069.1/Jaspar
Match Rank: | 3 |
Score: | 0.74 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCACGCTTGACGG TTCACGCATGAGTT |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.69 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TCACGCTTGACGG- NGTCACGCTTGGCTGC |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 5 |
Score: | 0.67 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCACGCTTGACGG- GTCATGCHTGRCTGS |
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PAX5/MA0014.2/Jaspar
Match Rank: | 6 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCACGCTTGACGG----- GTCACGCTTGGCTGCNCNN |
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Ahr::Arnt/MA0006.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TCACGCTTGACGG -CACGCA------ |
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PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TCACGCTTGACGG------ TTTMCGCTTSABTGAACACN |
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PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TCACGCTTGACGG GTCACGCTCNCTGA |
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Pax2/MA0067.1/Jaspar
Match Rank: | 10 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TCACGCTTGACGG AGTCACGC------- |
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