Information for 13-CAACAAAGTTCAC (Motif 18)

G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
Reverse Opposite:
C T A G C G A T A C T G C G T A C G T A G T A C A C G T A C G T A C G T A C T G A C G T A C G T A C T G
p-value:1e-8
log p-value:-2.028e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 19.8bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CAACAAAGTTCAC
---CAAAGGTCAG
 G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CAACAAAGTTCAC---
TCTCAAAGGTCACCTG
 G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAACAAAGTTCAC
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGTTCAC
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAACAAAGTTCAC
--ACAAAG-----
 G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAACAAAGTTCAC---
TCTCAAAGGTCACGAG
 G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGTTCAC
GGAACAAAGR----
 A C G T G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGTTCAC
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CAACAAAGTTCAC
VRRACAAWGG----
 A C G T G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:10
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CAACAAAGTTCAC
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A A G T C C G T A C G T A C G T A A C T G A C G T A C G T A G T C C G T A A G T C
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A