Information for 24-TGTTTATGACCTG (Motif 41)

A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G C T A G A C G T A G T C C G T A A C G T C G T A C G T A C T G A A G T C C G T A
p-value:1e-3
log p-value:-9.084e+00
Information Content per bp:1.938
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.8 +/- 26.8bp
Average Position of motif in Background46.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTATGACCTG-
NNAATTAATGACCNNN
 A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G A C G T
T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

PH0012.1_Cdx1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTATGACCTG-
NAATTTTATTACCTNN
 A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G A C G T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A

FOXL1/MA0033.2/Jaspar

Match Rank:3
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TGTTTATGACCTG
TGTTTAC------
 A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G
C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0067.1_Hoxc12/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TGTTTATGACCTG-
GNNNTTTTACGACCTNA
 A C G T A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G A C G T
C T A G G C T A T C G A C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C A G C T C G T A C T G A

Foxj2/MA0614.1/Jaspar

Match Rank:5
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTATGACCTG
TTGTTTAC------
 A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G
C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTTTATGACCTG
NTTTTACGAC---
 A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G
C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTATGACCTG-
NAATTTTATTACCNNN
 A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G A C G T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

FOXG1/MA0613.1/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGTTTATGACCTG
TTGTTTAC------
 A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G
C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:9
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTATGACCTG-
ANNTTTTACGACNTNN
 A C G T A C G T A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTTTATGACCTG
NTTTTATGAC---
 A C G T A C T G A G C T A C G T A C G T C G T A A C G T A C T G C G T A A G T C A G T C A C G T A T C G
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T