Information for 15-GATTAGCAGG (Motif 39)

A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
Reverse Opposite:
A G T C G T A C G A C T T A C G T G A C A C G T C G T A C G T A A C G T A T G C
p-value:1e-5
log p-value:-1.212e+01
Information Content per bp:1.811
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif43.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets40.6 +/- 25.6bp
Average Position of motif in Background48.9 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GATTAGCAGG
GGATTAGC---
 A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGCAGG
NNGGATTAGN---
 A C G T A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:3
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--GATTAGCAGG
RGGATTAR----
 A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGCAGG
GNGGATTAGN---
 A C G T A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:5
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCAGG
CGGATTAN----
 A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:6
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---GATTAGCAGG
VRGGATTARN---
 A C G T A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:7
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCAGG
NGGATTAA----
 A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:8
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCAGG
GGGATTANN---
 A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.73
Offset:-7
Orientation:forward strand
Alignment:-------GATTAGCAGG
TTGCCCGGATTAGG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--GATTAGCAGG
GGGATTAA----
 A C G T A C G T A T C G G T C A A C G T A C G T C G T A A C T G A T G C C T G A A C T G A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T