Information for 18-CTGTGTGCRRAGAGGG (Motif 28)

G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
Reverse Opposite:
A G T C A G T C A G T C A C G T A G T C A C G T A G C T A G C T A C T G T G A C G C T A G T A C C G T A A T G C C G T A C T A G
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.758
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif14.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.9 +/- 33.9bp
Average Position of motif in Background50.3 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CTGTGTGCRRAGAGGG
GGGCCGTGTGCAAAAA---
 A C G T A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-CTGTGTGCRRAGAGGG
NSTGTTTRCWCAGBNNN
 A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---CTGTGTGCRRAGAGGG
GTGCCGTGTGCAAA-----
 A C G T A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTGCRRAGAGGG
NNHTGTGGTTWN------
 A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:5
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CTGTGTGCRRAGAGGG
CCATTGTATGCAAAT----
 A C G T A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T A C G T A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CTGTGTGCRRAGAGGG
--GGGGCCCAAGGGGG
 G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
A C G T A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----CTGTGTGCRRAGAGGG
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CTGTGTGCRRAGAGGG
GTCTGTGGTTT-------
 A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.48
Offset:-2
Orientation:reverse strand
Alignment:--CTGTGTGCRRAGAGGG
NTNTATGTGCACATNNN-
 A C G T A C G T G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A A C G T

CENPB/MA0637.1/Jaspar

Match Rank:10
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:CTGTGTGCRRAGAGGG
-TTCGTNNNANGCGGG
 G A T C A C G T A T C G A C G T A C T G C A G T A C T G G T A C C T G A C T G A C G T A C T A G C G T A T A C G C T A G C T A G
A C G T C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G