p-value: | 1e-8 |
log p-value: | -1.996e+01 |
Information Content per bp: | 1.918 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.56% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 72.5 +/- 24.8bp |
Average Position of motif in Background | 40.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer
Match Rank: | 1 |
Score: | 0.57 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --ATCCTGCATCCTGACC ACATCCTGNT-------- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 2 |
Score: | 0.54 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC- -----------TGACCT |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 3 |
Score: | 0.52 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC--- -----------TGACCYCT |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 4 |
Score: | 0.50 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC--- -----------TGACCTYA |
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RORA/MA0071.1/Jaspar
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 11 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC----- -----------TGACCTTGAT |
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PB0024.1_Gcm1_1/Jaspar
Match Rank: | 6 |
Score: | 0.49 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---ATCCTGCATCCTGACC TCGTACCCGCATCATT--- |
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PB0077.1_Spdef_1/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | ATCCTGCATCCTGACC--- ---GTACATCCGGATTTTT |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 7 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC------- -------NNNNTGACCCGGCGCG |
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Hnf4a/MA0114.3/Jaspar
Match Rank: | 9 |
Score: | 0.48 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC-- --ATTGGACTTTGACCCC |
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GCM2/MA0767.1/Jaspar
Match Rank: | 10 |
Score: | 0.47 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | ATCCTGCATCCTGACC TACCCGCATN------ |
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