Information for 20-GCCCTCCTTTCTC (Motif 32)

A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A C T A G C G T A C T G A C G T A C T A G C T A G C G T A A C T G A C T G C T A G A G T C
p-value:1e-6
log p-value:-1.456e+01
Information Content per bp:1.934
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.6 +/- 25.6bp
Average Position of motif in Background46.9 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCCCTCCTTTCTC-
NNGCACCTTTCTCC
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCCTCCTTTCTC-----
--ANTCCTTTGTCTNNNN
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCCTCCTTTCTC--
-----CCTTTGTTTT
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCCTCCTTTCTC--------
-GCCTCCTCCMTCWGACTGKS
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCCCTCCTTTCTC
-----CCTTTGTT
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GCCCTCCTTTCTC
-----CCWTTGTY
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:GCCCTCCTTTCTC----
-----ACTTTCACTTTC
 A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCCTTTCTC-
GAGCCCTTGTCCCTAA
 A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

SP2/MA0516.1/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GCCCTCCTTTCTC-
GCCCCGCCCCCTCCC
 A C G T A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GCCCTCCTTTCTC
CNGTCCTCCC-----
 A C G T A C G T A C T G A G T C A G T C A G T C A C G T A G T C A G T C A C G T A G C T A C G T A G T C A C G T A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T