Information for 18-AGCAAGACGCCCT (Motif 25)

T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
Reverse Opposite:
C G T A A C T G T C A G A C T G T G A C A T C G A C G T A G T C G A C T A C G T A C T G A G T C A G C T
p-value:1e-8
log p-value:-1.885e+01
Information Content per bp:1.709
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif93.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets43.6 +/- 30.1bp
Average Position of motif in Background49.3 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PROX1/MA0794.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGCAAGACGCCCT-
--CAAGACGCCTTA
 T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T A C G T
A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

PB0143.1_Klf7_2/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGCAAGACGCCCT----
AAGCATACGCCCAACTT
 T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AGCAAGACGCCCT
TGGCACCATGCCAA
 A C G T T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGCAAGACGCCCT
-ACAAAGGNBCCT
 T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGACGCCCT
AAGGCAAGTGT----
 A C G T A C G T T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----AGCAAGACGCCCT
DCHCAGCAGGRGGCC--
 A C G T A C G T A C G T A C G T T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--AGCAAGACGCCCT
CTGGCAGNCTGCCA-
 A C G T A C G T T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:AGCAAGACGCCCT
---AGCGCGCC--
 T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.49
Offset:6
Orientation:forward strand
Alignment:AGCAAGACGCCCT--
------CTGCCCGCA
 T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.49
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAGACGCCCT-
TTGGCANNNTGCCAAG
 A C G T A C G T T C G A C T A G A G T C C G T A C T G A A C T G T G C A A T G C A C T G A G T C A G T C A G T C C G A T A C G T
G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G