Information for 13-TTMTCTMAAWAAA (Motif 20)

A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
Reverse Opposite:
A G C T A C G T A G C T C G A T A C G T A C G T A C G T C G T A A T C G C G T A A C T G C G T A C G T A
p-value:1e-8
log p-value:-1.997e+01
Information Content per bp:1.823
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.8 +/- 27.0bp
Average Position of motif in Background71.8 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0019.1_Foxl1_1/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TTMTCTMAAWAAA---
TAAATGTAAACAAAGGT
 A C G T A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:2
Score:0.62
Offset:-9
Orientation:reverse strand
Alignment:---------TTMTCTMAAWAAA
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTMTCTMAAWAAA
-TATGTAAATAT-
 A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
A C G T G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTMTCTMAAWAAA-----
-GTTCAAAAAAAAAATTC
 A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C

FOXC1/MA0032.2/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TTMTCTMAAWAAA
-TATGTAAATAT-
 A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TTMTCTMAAWAAA
-TAAGTAAACAAA
 A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTMTCTMAAWAAA---
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTMTCTMAAWAAA-
TACTGGAAAAAAAA
 A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTMTCTMAAWAAA
YSTTATCT-------
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
A G C T A T C G A G C T C G A T C T G A C G A T A T G C C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TTMTCTMAAWAAA
TCTTATCT-------
 A C G T A C G T A C G T A C G T G T A C A C G T A T G C C G A T G T C A C G T A C G T A G C T A C T G A C G T A C T G A
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T