Information for 12-CAHCAAGGTAGAGGGC (Motif 15)

A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
Reverse Opposite:
A C T G A G T C A G T C A G T C C G A T A G T C A C G T C T G A A G T C A T G C A G C T G C A T A T C G C G T A G A C T A C T G
p-value:1e-10
log p-value:-2.472e+01
Information Content per bp:1.683
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif17.2
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets49.3 +/- 29.3bp
Average Position of motif in Background59.8 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC-
-----AGGTCAAGGTCA
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0014.1_Esrra_1/Jaspar

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CAHCAAGGTAGAGGGC
TATTCAAGGTCATGCGA
 A C G T A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC-
-----AGGTCAAGGTCA
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.51
Offset:3
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC
---ACAGGATGTGGT-
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
A C G T A C G T A C G T T C G A T A G C G T C A A C T G C T A G C G T A C G A T A C T G A C G T A C T G A C T G A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CAHCAAGGTAGAGGGC------
-----NNNAAGGGGGCGGGNNN
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC
---CAAGGHCANV---
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:7
Score:0.50
Offset:2
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC
--TCAAGGTCAT----
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
A C G T A C G T G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC
------GGGGGGGG--
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C T A G T C A G T C A G T A C G C T A G A C T G A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:9
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CAHCAAGGTAGAGGGC
--CAAAGGTCAAGGG-
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.49
Offset:2
Orientation:reverse strand
Alignment:CAHCAAGGTAGAGGGC--
--NNAGGGACAAGGGCNC
 A G T C C G T A G A C T A T G C C G T A C T G A A T C G C T A G G A C T G T C A T C A G C G T A T A C G A C T G A C T G G T A C A C G T A C G T
A C G T A C G T A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C