p-value: | 1e-13 |
log p-value: | -3.074e+01 |
Information Content per bp: | 1.705 |
Number of Target Sequences with motif | 42.0 |
Percentage of Target Sequences with motif | 5.62% |
Number of Background Sequences with motif | 633.9 |
Percentage of Background Sequences with motif | 1.37% |
Average Position of motif in Targets | 52.9 +/- 26.8bp |
Average Position of motif in Background | 50.4 +/- 27.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.03 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SA0001.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTCYNTCCTWCAG--- TTTTTTTTTTTTTTCAGGTT |
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SA0002.1_at_AC_acceptor/Jaspar
Match Rank: | 2 |
Score: | 0.71 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TTCYNTCCTWCAG--- TTTTTTTTTTTTTTCAGGTT |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | 8 |
Orientation: | reverse strand |
Alignment: | TTCYNTCCTWCAG- --------CACAGN |
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Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TTCYNTCCTWCAG--- -GGCCYCCTGCTGDGH |
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Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCYNTCCTWCAG-- ---CCCCCTGCTGTG |
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ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 6 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---TTCYNTCCTWCAG WCATTTTGKCCTCYT- |
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PB0205.1_Zic1_2/Jaspar
Match Rank: | 7 |
Score: | 0.54 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCYNTCCTWCAG----- ---TNTCCTGCTGTGNNG |
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Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer
Match Rank: | 8 |
Score: | 0.54 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | TTCYNTCCTWCAG--- ------CCTGCTGAGH |
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PB0206.1_Zic2_2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TTCYNTCCTWCAG----- ---TCNCCTGCTGNGNNN |
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POL002.1_INR/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | TTCYNTCCTWCAG---- ---------TCAGTCTT |
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