Information for 21-GAGAACCATGTAA (Motif 27)

A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A
Reverse Opposite:
A C G T C G A T C G T A A G T C C G T A A C G T A C T G A C T G A C G T C G A T A G T C C G A T A G T C
p-value:1e-6
log p-value:-1.538e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.5 +/- 24.6bp
Average Position of motif in Background54.9 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGAACCATGTAA----
TAAATACATGTAAAATT
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGAACCATGTAA----
AATATACATGTAAAATT
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGAACCATGTAA----
AATATACATGTAAAACA
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAGAACCATGTAA----
AATATACATGTAATATA
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGAACCATGTAA----
AAAATACATGTAATACT
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAGAACCATGTAA----
AAAATACATGTAAAAAT
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GAGAACCATGTAA
NNTNANAACAATTNNA
 A C G T A C G T A C G T A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

PB0072.1_Sox5_1/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GAGAACCATGTAA-
TTTAGAACAATAAAAT
 A C G T A C G T A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

USF2/MA0526.1/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GAGAACCATGTAA--
----GTCATGTGACC
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C

HLTF/MA0109.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGAACCATGTAA
---AACCTTATAT
 A C T G C G T A A C T G C G T A C G T A G T A C A G T C C G T A A C G T A C T G A C G T C G T A G T C A
A C G T A C G T A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T