Information for 11-CATCHACACAAGGGCC (Motif 24)

G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
Reverse Opposite:
C T A G C T A G A G T C A G T C T G A C C G A T C G A T A T C G A C G T A T C G A C G T C A G T A C T G C G T A A C G T A C T G
p-value:1e-7
log p-value:-1.668e+01
Information Content per bp:1.745
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif12.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.0 +/- 30.2bp
Average Position of motif in Background37.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CATCHACACAAGGGCC
TCCAATCCACA--------
 A C G T A C G T A C G T G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CATCHACACAAGGGCC
SSAATCCACANN------
 A C G T A C G T G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CATCHACACAAGGGCC
AAACCACANN------
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:CATCHACACAAGGGCC
------AACAAAGG--
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CATCHACACAAGGGCC
-ATCCAC---------
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:6
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CATCHACACAAGGGCC-
--CTCACACAATGGCGC
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CATCHACACAAGGGCC
NWAACCACADNN-----
 A C G T G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:8
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CATCHACACAAGGGCC
------CCGATTGGCT
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CATCHACACAAGGGCC
-----RAACAATGGN-
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CATCHACACAAGGGCC
AAACCACAGAN-----
 G T A C G T C A C G A T A G T C G T C A C G T A A T G C G T C A A T G C C G T A G C T A A C T G C T A G A C T G A G T C A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T