Information for 9-VCMGCGGGTA (Motif 33)

T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A
Reverse Opposite:
C G A T C G T A A G T C A G T C A G T C A C T G A G T C A C T G A C T G A G T C
p-value:1e-7
log p-value:-1.725e+01
Information Content per bp:1.726
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.37%
Number of Background Sequences with motif395.8
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets48.8 +/- 24.3bp
Average Position of motif in Background51.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:VCMGCGGGTA--
--GGCGGGAAAH
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:VCMGCGGGTA
CWGGCGGGAA
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:VCMGCGGGTA--
--GGCGGGAARN
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T A C G T
A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:VCMGCGGGTA--
-GGGCGGGAAGG
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T A C G T
A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:VCMGCGGGTA---
-TGGCGGGAAAHB
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T A C G T A C G T
A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-VCMGCGGGTA-
BTKGGCGGGAAA
 A C G T T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T
A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--VCMGCGGGTA
DCTCAGCAGG--
 A C G T A C G T T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:VCMGCGGGTA--
-GGGCGGGAAGG
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T A C G T
A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

GCM1/MA0646.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:VCMGCGGGTA-
CATGCGGGTAC
 T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--VCMGCGGGTA---
DCHCAGCAGGRGGCC
 A C G T A C G T T C A G G T A C T G A C T C A G A G T C A C T G C T A G T C A G G C A T C G T A A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C