Information for 17-CATTATCTCACGT (Motif 29)

A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T
Reverse Opposite:
C T G A G T A C T A C G C G A T C T A G C T G A T A C G C T G A C G A T G T C A G C T A A C G T A T C G
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.712
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif26.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets57.0 +/- 31.7bp
Average Position of motif in Background58.9 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CATTATCTCACGT
--HTTTCCCASG-
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T

Id2/MA0617.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CATTATCTCACGT--
-------TCACGTGC
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CATTATCTCACGT-
--------CACGTG
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C A C T G A G C T A C T G

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:CATTATCTCACGT----
-------GCACGTACCC
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C T G A T G A C A T C G G A C T G T C A A G T C T A G C G A T C

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CATTATCTCACGT--
-----GGTCACGTGC
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CATTATCTCACGT--
-------GCACGTAY
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CATTATCTCACGT--
-------GCACGTNC
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:8
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CATTATCTCACGT-
------BGCACGTA
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A T G A G T C C T G A T A G C C T A G A G C T T G C A

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CATTATCTCACGT----
-------TCACGTGACC
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T C A A G T C C T A G A C G T A T C G T C G A A G T C A T G C

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATTATCTCACGT-
-NTTTTCACACCTT
 A T G C G T C A C A G T C A G T G C T A G A C T A T G C A G C T A G T C C G T A A T G C C A T G A G C T A C G T
A C G T C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T