p-value: | 1e-13 |
log p-value: | -3.170e+01 |
Information Content per bp: | 1.700 |
Number of Target Sequences with motif | 6.0 |
Percentage of Target Sequences with motif | 0.82% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 38.0 +/- 16.4bp |
Average Position of motif in Background | 43.6 +/- 12.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PH0048.1_Hoxa13/Jaspar
Match Rank: | 1 |
Score: | 0.56 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACAGCTCTCTTGAAAT-- --AAACCTCGTAAAATTT |
|
|
|
PH0068.1_Hoxc13/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | ACAGCTCTCTTGAAAT-- --AAAGCTCGTAAAATTT |
|
|
|
HOXC13/MA0907.1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | ACAGCTCTCTTGAAAT -----GCTCGTAAAAA |
|
|
|
PH0171.1_Nkx2-1/Jaspar
Match Rank: | 4 |
Score: | 0.50 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACAGCTCTCTTGAAAT- -TAAGCCACTTGAAATT |
|
|
|
PH0114.1_Nkx2-5/Jaspar
Match Rank: | 5 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACAGCTCTCTTGAAAT- -TAAGCCACTTGAATTT |
|
|
|
PH0113.1_Nkx2-4/Jaspar
Match Rank: | 6 |
Score: | 0.49 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | ACAGCTCTCTTGAAAT- -TAAGCCACTTGAAATT |
|
|
|
Rhox11/MA0629.1/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------ACAGCTCTCTTGAAAT TCNNTTTACAGCGNNNT------ |
|
|
|
PH0157.1_Rhox11_1/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------ACAGCTCTCTTGAAAT TCNNTTTACAGCGNNNT------ |
|
|
|
PH0158.1_Rhox11_2/Jaspar
Match Rank: | 9 |
Score: | 0.49 |
Offset: | -7 |
Orientation: | reverse strand |
Alignment: | -------ACAGCTCTCTTGAAAT TCNCTTTACAGCGNNNT------ |
|
|
|
MSC/MA0665.1/Jaspar
Match Rank: | 10 |
Score: | 0.48 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -ACAGCTCTCTTGAAAT AACAGCTGTT------- |
|
|
|