Information for 23-GGGAGAGGTCACGAGA (Motif 37)

C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
Reverse Opposite:
A G C T T A G C A C G T G A T C A C T G A C G T A C T G C G T A A G T C A G T C A C G T A G T C A C G T A G T C A G T C A G T C
p-value:1e-3
log p-value:-9.068e+00
Information Content per bp:1.919
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.27%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.3 +/- 21.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGGAGAGGTCACGAGA
--CAAAGGTCAAGGG-
 C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
A C G T A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGGTCACGAGA
GGCGAGGGGTCAAGGGC
 A C G T C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GGGAGAGGTCACGAGA
---AGRGGTCA-----
 C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:GGGAGAGGTCACGAGA
----AAGGTCAC----
 C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGGTCACGAGA
TCTCAAAGGTCACGAG-
 A C G T C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGGTCACGAGA
TCTCAAAGGTCACCTG-
 A C G T C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGGAGAGGTCACGAGA
TAGGGCAAAGGTCA-----
 A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGAGGTCACGAGA
NTNNNGGGGTCANGNNN
 A C G T C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGGAGAGGTCACGAGA
ANGNAAAGGTCA-----
 A C G T C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGGAGAGGTCACGAGA
---TRAGGTCA-----
 C T A G A C T G A C T G C G T A A C T G C G T A A C T G C T A G A C G T A G T C C G T A A G T C C T A G C G T A A T C G C T G A
A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T A C G T