Information for 4-TGTGCCAGRGCAG (Motif 11)

G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
Reverse Opposite:
A T G C C G A T C A T G T A G C A G C T G A T C G C A T A C T G C T A G T A G C C G T A T G A C C T G A
p-value:1e-11
log p-value:-2.728e+01
Information Content per bp:1.637
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.57%
Number of Background Sequences with motif288.3
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets49.7 +/- 22.7bp
Average Position of motif in Background49.1 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-TGTGCCAGRGCAG
CTGTTCCTGG----
 A C G T G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGCCAGRGCAG
NNNNTTGTGTGCTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TGTGCCAGRGCAG
-TTGCCAAG----
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGTGCCAGRGCAG
CGTGCCAAG----
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TGTGCCAGRGCAG
-ATGCCAGACN--
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGCCAGRGCAG----
--TCCCAGMCRAGCCCC
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGTGCCAGRGCAG
--TGCCAA-----
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGTGCCAGRGCAG
-ATGCCAACC---
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGTGCCAGRGCAG
GGTGCCAAGT---
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGTGCCAGRGCAG
-ATGCCCACC---
 G A C T A C T G C G A T A T C G G A T C G T A C C G T A C T A G T C G A A C T G G T A C G C T A T A C G
A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T