Information for 1-RGATGAGTCAYWN (Motif 1)

C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
Reverse Opposite:
T A G C G C A T T C A G A C G T A C T G G T C A T A G C A C G T G T A C C G T A G A C T A G T C G A T C
p-value:1e-48
log p-value:-1.117e+02
Information Content per bp:1.700
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif7.41%
Number of Background Sequences with motif189.6
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets49.2 +/- 26.8bp
Average Position of motif in Background54.8 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RGATGAGTCAYWN
-GATGAGTCAT--
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C G T T A C G T G C A C G A T C A T G C G T A A T C G C G A T G T A C C G T A A G C T A C G T A C G T

JUND/MA0491.1/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:RGATGAGTCAYWN
-NATGAGTCACN-
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C G T A T C G T C G A A C G T A C T G C G T A T A C G A C G T A G T C C G T A A G T C G A T C A C G T

JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer

Match Rank:3
Score:0.94
Offset:1
Orientation:forward strand
Alignment:RGATGAGTCAYWN
-RATGASTCAT--
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C G T C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T A C G T A C G T

Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:RGATGAGTCAYWN
NDATGASTCATH-
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
C A T G C T A G T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A G C T G A T C A C G T

FOS/MA0476.1/Jaspar

Match Rank:5
Score:0.94
Offset:1
Orientation:reverse strand
Alignment:RGATGAGTCAYWN
-NATGAGTCANN-
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C G T T C G A T C G A A C G T A C T G C G T A T A C G A C G T G T A C C G T A A T G C G T C A A C G T

Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:RGATGAGTCAYWN
NNATGAGTCATN-
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
C A T G C T A G T C G A A C G T A C T G C G T A A T C G A C G T G T A C C G T A A G C T G A T C A C G T

PB0142.1_Jundm2_2/Jaspar

Match Rank:7
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--RGATGAGTCAYWN-
ATTGATGAGTCACCAA
 A C G T A C G T C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G A C G T
T G C A C A G T A C G T C T A G T C G A A G C T A C T G G T C A A T C G G A C T T G A C C T G A A G T C G T A C C T G A G T C A

Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.93
Offset:1
Orientation:forward strand
Alignment:RGATGAGTCAYWN
-NATGASTCABNN
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C G T C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C

Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer

Match Rank:9
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:RGATGAGTCAYWN
-GATGAGTCATCC
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C G T C T A G T C G A G A C T A C T G C G T A A T C G C G A T T G A C C G T A A G C T G A T C G T A C

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.93
Offset:0
Orientation:forward strand
Alignment:RGATGAGTCAYWN
GGATGACTCAT--
 C T A G T C A G C T G A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C C G T A A T C G
A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T A C G T