Information for 5-GGCGATTAATGAC (Motif 9)

A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C
Reverse Opposite:
A T C G A C G T A G T C C G T A A C G T A C G T C G T A C G T A A G C T G T A C C A T G A T G C A G T C
p-value:1e-13
log p-value:-3.136e+01
Information Content per bp:1.851
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets56.8 +/- 27.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0073.1_Hoxc9/Jaspar

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:GGCGATTAATGAC----
-NNAATTAATGACCNNN
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T
A C G T T G C A G C A T C T G A C T G A C G A T A C G T C G T A C G T A A G C T A C T G C T G A A G T C G A T C A G C T G T A C A G T C

NKX6-1/MA0674.1/Jaspar

Match Rank:2
Score:0.72
Offset:5
Orientation:reverse strand
Alignment:GGCGATTAATGAC
-----TTAATTAN
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GGCGATTAATGAC
----GKTAATGR-
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

PH0120.1_Nkx6-3/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCGATTAATGAC----
GAAAATTAATTACTTTG
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T
C T A G T G C A G C A T C G T A G C T A C G A T G A C T C G T A C G T A C G A T A C G T C T G A T G A C A G C T A C G T A G C T A C T G

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:forward strand
Alignment:GGCGATTAATGAC-
--TGATTRATGGCY
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C A C G T
A C G T A C G T C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C

PH0150.1_Pou4f3/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGCGATTAATGAC---
AGTTATTAATGAGGTC
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C A C G T A C G T A C G T
G C T A T C A G C A G T G C A T C G T A G A C T C G A T C G T A C G T A G A C T C A T G G T C A C T A G A C T G G A C T G A T C

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:GGCGATTAATGAC
-----TTAATTAN
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C G A T G A C T C G T A C G T A C G A T C A G T C T G A T A C G

PH0118.1_Nkx6-1_1/Jaspar

Match Rank:8
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GGCGATTAATGAC----
GAAAATTAATTACTTCG
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C A C G T A C G T A C G T A C G T
C T A G T G C A G C T A C G T A C G T A C G A T A G C T C G T A C G T A C G A T A C G T C T G A G T A C G A C T A G C T A G T C A T C G

EMX1/MA0612.1/Jaspar

Match Rank:9
Score:0.67
Offset:4
Orientation:forward strand
Alignment:GGCGATTAATGAC-
----CCTAATTACC
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C A C G T
A C G T A C G T A C G T A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGCGATTAATGAC
--TGATTGATGA-
 A C T G A T C G G A T C A C T G C T G A A C G T A C G T C G T A G T C A A C G T A C T G C G T A A T G C
A C G T A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T