Information for 3-ASTMWTTATGASA (Motif 7)

C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A
Reverse Opposite:
A C G T A T G C A C G T A G T C C G T A A C G T C G T A C G T A C G T A C A G T G T C A A T G C C G A T
p-value:1e-14
log p-value:-3.256e+01
Information Content per bp:1.858
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.2 +/- 27.4bp
Average Position of motif in Background49.0 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXC10/MA0905.1/Jaspar

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ASTMWTTATGASA
--NTTTTACGAC-
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A
A C G T A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

PH0068.1_Hoxc13/Jaspar

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:ASTMWTTATGASA---
NAATTTTACGAGNTNN
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ASTMWTTATGASA---
ANNTTTTACGACNTNN
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ASTMWTTATGASA-
BAGTCATANTGAAAG
 A C G T C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A A C G T
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G

PH0048.1_Hoxa13/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:ASTMWTTATGASA---
ANATTTTACGAGNNNN
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:6
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ASTMWTTATGASA
--NTTTTATGAC-
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A
A C G T A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:ASTMWTTATGASA
--NTTTTACGAC-
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A
A C G T A C G T C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:ASTMWTTATGASA
---TTTTATTGC-
 C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A
A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T

PH0175.1_Vax2/Jaspar

Match Rank:9
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ASTMWTTATGASA
GTGCACTAATTAAGAC-
 A C G T A C G T A C G T A C G T C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ASTMWTTATGASA---
WNAGTCADAVTGAAACTN
 A C G T A C G T C G T A A T C G A C G T G T C A C G A T A C G T A C G T C G T A A C G T A C T G C G T A A T C G C G T A A C G T A C G T A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G