Information for 5-RGAAAAACAMGCWGAT (Motif 6)

C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
Reverse Opposite:
C T G A A C G T A G T C C G A T C T A G G T A C A C G T A C G T A C T G A G C T A C G T A G C T A C G T A C G T A T G C A G T C
p-value:1e-14
log p-value:-3.260e+01
Information Content per bp:1.788
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 25.4bp
Average Position of motif in Background82.4 +/- 2.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-RGAAAAACAMGCWGAT
TGGAAAA----------
 A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RGAAAAACAMGCWGAT
GGAAANTGAAACTNA-
 C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---RGAAAAACAMGCWGAT
CAAACAACAACACCT----
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---RGAAAAACAMGCWGAT
AATGGAAAAT---------
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:RGAAAAACAMGCWGAT
AAACAAACATTC----
 C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-RGAAAAACAMGCWGAT
AAAAATAACAAACGG--
 A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:7
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----RGAAAAACAMGCWGAT
GTTAAAAAAAAAAATTA---
 A C G T A C G T A C G T A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---RGAAAAACAMGCWGAT
NNTGGAAANN---------
 A C G T A C G T A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:RGAAAAACAMGCWGAT
-------CACGCA---
 C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:10
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----RGAAAAACAMGCWGAT
TACTGGAAAAAAAA------
 A C G T A C G T A C G T A C G T C T A G A T C G C G T A C G T A C T G A G T C A C T G A A G T C C G T A G T C A A C T G A G T C C G T A C T A G C G T A A G C T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T