Information for 25-AGAGATCACWACRGGA (Motif 51)

C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A
Reverse Opposite:
A C G T A G T C A G T C A G C T A T C G A G C T C G A T A T C G A C G T A C T G G C T A A C G T A G T C C G A T A G T C A G C T
p-value:1e-4
log p-value:-9.307e+00
Information Content per bp:1.907
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif14.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.6 +/- 25.1bp
Average Position of motif in Background41.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)2.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AGAGATCACWACRGGA
AADGAGVCANYASTACAGNC
 A C G T A C G T A C G T A C G T C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A
G C T A T C G A C G A T C T A G C T G A C A T G T A G C G T A C C T G A C A T G G A T C G C T A T A G C G A C T C T G A A T G C T G C A C T A G C T G A G A T C

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGATCACWACRGGA-
--ATGTCACAACAACAC
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A A C G T
A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AGAGATCACWACRGGA--
---GAGCACAGCAGGACA
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

NR4A2/MA0160.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGAGATCACWACRGGA
-AAGGTCAC-------
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGATCACWACRGGA
AGRGGTCA--------
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----AGAGATCACWACRGGA
AAGGCGAAATCATCGCA---
 A C G T A C G T A C G T A C G T C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGAGATCACWACRGGA--
---CCACACAGCAGGAGA
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AGAGATCACWACRGGA--
------CACAGCAGGGGG
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:AGAGATCACWACRGGA----
-----DCHCAGCAGGRGGCC
 C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Nr1h3::Rxra/MA0494.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-AGAGATCACWACRGGA--
NNGAGGTTACTNNAGGTCA
 A C G T C T G A A C T G C G T A C T A G C G T A C G A T A G T C C G T A A T G C C G T A C T G A A T G C C T G A A C T G C T A G C G T A A C G T A C G T
T G A C G T C A T C A G T C G A C A T G C A T G A G C T G A C T G C T A G A T C G A C T G A C T A G C T T C G A C T A G C A T G C A G T A G T C T C G A