Information for 24-AGAGAGAGAGAGAGAB (Motif 50)

C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
Reverse Opposite:
T G C A C G A T G A T C C G A T A G T C A C G T A G T C A G C T A G T C A C G T A G T C A G C T A G T C A G C T A G T C A G C T
p-value:1e-4
log p-value:-9.367e+00
Information Content per bp:1.785
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif43.6
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets51.6 +/- 24.5bp
Average Position of motif in Background48.1 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAB
AGAAAGTGAAAGTGA-
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAB
---GAAAGTGAAAGT-
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:AGAGAGAGAGAGAGAB
-NNNACCGAGAGTNNN
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAB
---GGGCGGGAAGG--
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGAGAGAGAGAGAGAB---
AAANNGAAAGTGAAAGTAAAN
 A C G T A C G T C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAB
AGATGKDGAGATAAG-
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGAGAGAGAGAGAGAB
AGGTGNCAGACAG----
 A C G T C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGAGAGAGAGAGAGAB
TGCGGAGTGGGACTGG-
 A C G T C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.50
Offset:4
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAB
----GGCGGGAARN--
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AGAGAGAGAGAGAGAB
-GAAAGTGAAAGT---
 C T G A A C T G C T G A A C T G C T G A A C T G C G T A A C T G C T G A A C T G C G T A C T A G C G T A C T A G G C T A A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T A C G T A C G T