Information for 20-CTTSTGTTGGSTR (Motif 45)

A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
Reverse Opposite:
A G T C C G T A A T G C A G T C A G T C C G T A C G T A A G T C C G T A T A C G T C G A C G T A A C T G
p-value:1e-6
log p-value:-1.533e+01
Information Content per bp:1.888
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.7 +/- 17.4bp
Average Position of motif in Background66.4 +/- 15.6bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0057.1_Hoxb13/Jaspar

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CTTSTGTTGGSTR
NNAATTTTATTGGNTN
 A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTTSTGTTGGSTR
------TTGGCA-
 A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTTSTGTTGGSTR
RCCATMTGTT-----
 A C G T A C G T A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T A C G T A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTTSTGTTGGSTR
ACCATCTGTT-----
 A C G T A C G T A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTTSTGTTGGSTR
-TTTTATKRGG--
 A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTTSTGTTGGSTR
NTTTTATTGG---
 A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T A C G T

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTTSTGTTGGSTR--
NTNTTGTTGTTTGTN
 A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTTSTGTTGGSTR-
-----NTTGGCANN
 A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTTSTGTTGGSTR---
NNCTTTGTTTTGNTNNN
 A C G T A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTTSTGTTGGSTR
NNTGTTTATTTTGGCA-
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C G T A C T G A C G T A C G T A C T G A C T G A T C G A C G T C T A G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T