Information for 18-GTGGGTTAATTAT (Motif 43)

C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T
Reverse Opposite:
C T G A A C G T C G T A C G T A A G C T A C G T G T C A C G T A A G T C A G T C A T G C C G T A G A T C
p-value:1e-6
log p-value:-1.591e+01
Information Content per bp:1.754
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif34.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets45.5 +/- 28.5bp
Average Position of motif in Background51.4 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxd3/MA0912.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTGGGTTAATTAT---
TTGAGTTAATTAACCT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0079.1_Hoxd3/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTGGGTTAATTAT---
TTGAGTTAATTAACCT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
G A C T C G A T C A T G C T G A C A T G A C G T G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A T G C A G C T

PH0174.1_Vax1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTGGGTTAATTAT---
CTNNGNTAATTAACNT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
G A T C G C A T C T A G C T A G T C A G A G C T G A C T G T C A G C T A C G A T C A G T C T G A C G T A A G T C A T C G A C G T

Hoxb5/MA0904.1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTGGGTTAATTAT---
ATGNGCTAATTANCNT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0060.1_Hoxb5/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GTGGGTTAATTAT---
ATGNGCTAATTANCNT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
C G T A G A C T C A T G C G T A C T A G A T G C G A C T G T C A G C T A C A G T A C G T C T G A T G A C G A T C A C T G A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:6
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GTGGGTTAATTAT-
CTGAGGTAATTAAT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T

PH0072.1_Hoxc8/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GTGGGTTAATTAT---
TTGGGGTAATTAACGT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T

PH0036.1_Gsx2/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGGGTTAATTAT---
NTNNGCTAATTANCNT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
G T C A G A C T T A G C T C G A C T A G A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C G A G A T C A T G C A G C T

PH0049.1_Hoxa2/Jaspar

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GTGGGTTAATTAT---
NTGAGCTAATTACCNT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T A C G T A C G T
G C T A G C A T C A T G C T G A C T A G A T G C G A C T T G C A G T C A A C G T A C G T C T G A T A G C G A T C A C G T G A C T

mix-a/MA0621.1/Jaspar

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:GTGGGTTAATTAT-
---AATTAATTAGT
 C T A G C G A T A T C G C T A G C T A G A C G T A C G T C G T A C T G A C G A T A C G T T C G A G A C T A C G T
A C G T A C G T A C G T C G T A C T G A G A C T A C G T C G T A C G T A A C G T A C G T C G T A C T A G A C G T