Information for 16-DSAACCCGCT (Motif 38)

C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T
Reverse Opposite:
C T G A A C T G A G T C A T C G A C T G A T C G A G C T A C G T A T G C G T A C
p-value:1e-7
log p-value:-1.731e+01
Information Content per bp:1.718
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.69%
Number of Background Sequences with motif502.0
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets48.5 +/- 24.7bp
Average Position of motif in Background50.3 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:DSAACCCGCT
--AGCGCGCC
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T
A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-DSAACCCGCT-----
TCGTACCCGCATCATT
 A C G T C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:DSAACCCGCT-
------NGCTN
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

GCM2/MA0767.1/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:DSAACCCGCT--
--TACCCGCATN
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T A C G T
A C G T A C G T G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:DSAACCCGCT
----CACGCA
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T
A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:DSAACCCGCT--
-GTACCCGCATN
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T A C G T
A C G T T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:DSAACCCGCT-
--AAACCGCAA
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T
A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.58
Offset:4
Orientation:forward strand
Alignment:DSAACCCGCT----
----CCTGCTGAGH
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:DSAACCCGCT--
--AAACCGCAAA
 C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T A C G T
A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-DSAACCCGCT------
TACGCCCCGCCACTCTG
 A C G T C A T G A T C G C G T A C T G A T A G C G T A C T A G C C T A G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G